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Wgs Data, supplied by Genomics England, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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shallow whole genome sequencing wgs data  (Taxon Biosciences)
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Shallow Whole Genome Sequencing Wgs Data, supplied by Taxon Biosciences, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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shallow whole genome sequencing wgs data - by Bioz Stars, 2026-08
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genome sequencing wgs data  (Genomics England)
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Genomics England genome sequencing wgs data
Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; <t>WGII,</t> <t>whole-genome</t> instability index;ll *, P < 0.05.
Genome Sequencing Wgs Data, supplied by Genomics England, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/wgs+data/pmc13136883-12-9-34?v=Genomics+England
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genome sequencing wgs data - by Bioz Stars, 2026-08
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raw wgs data  (Biotechnology Information)
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Biotechnology Information raw wgs data
Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; <t>WGII,</t> <t>whole-genome</t> instability index;ll *, P < 0.05.
Raw Wgs Data, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/wgs+data/pmc13156104-241-5-14?v=Biotechnology+Information
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raw wgs data - by Bioz Stars, 2026-08
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sequences sequencing data bp average length bp n50 length bp coverage x wgs dnbseq t7  (Complete Genomics Inc)
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Complete Genomics Inc sequences sequencing data bp average length bp n50 length bp coverage x wgs dnbseq t7
Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; <t>WGII,</t> <t>whole-genome</t> instability index;ll *, P < 0.05.
Sequences Sequencing Data Bp Average Length Bp N50 Length Bp Coverage X Wgs Dnbseq T7, supplied by Complete Genomics Inc, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/wgs+data/pm41813731-73-5-19?v=Complete+Genomics+Inc
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sequences sequencing data bp average length bp n50 length bp coverage x wgs dnbseq t7 - by Bioz Stars, 2026-08
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genome sequence wgs data sets  (Biotechnology Information)
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Biotechnology Information genome sequence wgs data sets
Clustering of the A. paragallinarum samples based on cgMLST. ( A ) Minimum spanning tree based on the allelic profiles of 1,170 core gene targets from <t>57</t> <t>whole-genome</t> samples using the SeqSphere+ software. ( B ) cgMLST dendrogram displaying 57 whole genome-sequenced A. paragallinarum samples. The distance matrix was built from all pairwise allelic profile comparisons of 1,170 cgMLST targets using the missing values as an own category option in SeqSphere+ software . Samples are color-coded by geographic origin, and dendrograms are rooted by the AP08_SA.
Genome Sequence Wgs Data Sets, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/wgs+data/pmc12977546-91-15-25?v=Biotechnology+Information
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genome sequence wgs data sets - by Bioz Stars, 2026-08
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preprocessing whole genome sequencing wgs data  (Biotechnology Information)
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Biotechnology Information preprocessing whole genome sequencing wgs data
Clustering of the A. paragallinarum samples based on cgMLST. ( A ) Minimum spanning tree based on the allelic profiles of 1,170 core gene targets from <t>57</t> <t>whole-genome</t> samples using the SeqSphere+ software. ( B ) cgMLST dendrogram displaying 57 whole genome-sequenced A. paragallinarum samples. The distance matrix was built from all pairwise allelic profile comparisons of 1,170 cgMLST targets using the missing values as an own category option in SeqSphere+ software . Samples are color-coded by geographic origin, and dendrograms are rooted by the AP08_SA.
Preprocessing Whole Genome Sequencing Wgs Data, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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preprocessing whole genome sequencing wgs data - by Bioz Stars, 2026-08
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Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; WGII, whole-genome instability index;ll *, P < 0.05.

Journal: Molecular Cancer Research

Article Title: Contrasting Features of Papillary and Chromophobe Renal Cell Carcinoma Revealed by Whole-Genome Sequencing

doi: 10.1158/1541-7786.MCR-25-0616

Figure Lengend Snippet: Summary of clinical correlations adjusted for sex, age of sampling, and stage. A, ChCC ( n = 61) and ( B ) pRCC ( n = 103). CN, copy number; MB, megabase; SNV, single-nucleotide variant; TCRA, T-cell receptor-α; WGII, whole-genome instability index;ll *, P < 0.05.

Article Snippet: To address this shortcoming, we report the analysis of whole-genome sequencing (WGS) data generated on tumor–normal (T/N) pairs from 164 patients recruited from NHS Genomic Medicine Centres (GMC) across England, as part of the Genomics England 100,000 Genomes Project (100kGP, RRID: SCR_010502; refs , ).

Techniques: Sampling, Variant Assay

Clustering of the A. paragallinarum samples based on cgMLST. ( A ) Minimum spanning tree based on the allelic profiles of 1,170 core gene targets from 57 whole-genome samples using the SeqSphere+ software. ( B ) cgMLST dendrogram displaying 57 whole genome-sequenced A. paragallinarum samples. The distance matrix was built from all pairwise allelic profile comparisons of 1,170 cgMLST targets using the missing values as an own category option in SeqSphere+ software . Samples are color-coded by geographic origin, and dendrograms are rooted by the AP08_SA.

Journal: Journal of Clinical Microbiology

Article Title: A standardized, genome-guided MLST scheme for Avibacterium paragallinarum : enhanced epidemiological typing and validation against existing methods

doi: 10.1128/jcm.01267-25

Figure Lengend Snippet: Clustering of the A. paragallinarum samples based on cgMLST. ( A ) Minimum spanning tree based on the allelic profiles of 1,170 core gene targets from 57 whole-genome samples using the SeqSphere+ software. ( B ) cgMLST dendrogram displaying 57 whole genome-sequenced A. paragallinarum samples. The distance matrix was built from all pairwise allelic profile comparisons of 1,170 cgMLST targets using the missing values as an own category option in SeqSphere+ software . Samples are color-coded by geographic origin, and dendrograms are rooted by the AP08_SA.

Article Snippet: A total of 75 A. paragallinarum samples were used in the study, consisting of 45 whole-genome sequence (WGS) data sets from the National Center for Biotechnology Information (NCBI) database in March 2023 and 30 additional samples, including 25 clinical samples (frozen isolates in glycerol, active culture plates, or PCR-positive samples in BHI broth) and five WGS data sets obtained from state diagnostic laboratories, including Salisbury Animal Health Laboratory (SAHL; Salisbury, Maryland); Iowa State Diagnostic Laboratory (Ames, Iowa), Lasher Laboratory (Georgetown, Delaware), Ohio Animal Diseases Diagnostic Laboratory (ADDL; Reynoldsburg, Ohio), and CEVA Animal Health (Lenexa, Kansas).

Techniques: Software

Minimum spanning tree of whole genome-sequenced samples based on two MLST profiles color-coded based on their geographic origin. ( A ) Minimum spanning tree of the WGS samples created using the seven-locus MLST scheme described by Guo et al. . ( B ) Minimum spanning tree of the WGS samples created using the MLST scheme developed in this study.

Journal: Journal of Clinical Microbiology

Article Title: A standardized, genome-guided MLST scheme for Avibacterium paragallinarum : enhanced epidemiological typing and validation against existing methods

doi: 10.1128/jcm.01267-25

Figure Lengend Snippet: Minimum spanning tree of whole genome-sequenced samples based on two MLST profiles color-coded based on their geographic origin. ( A ) Minimum spanning tree of the WGS samples created using the seven-locus MLST scheme described by Guo et al. . ( B ) Minimum spanning tree of the WGS samples created using the MLST scheme developed in this study.

Article Snippet: A total of 75 A. paragallinarum samples were used in the study, consisting of 45 whole-genome sequence (WGS) data sets from the National Center for Biotechnology Information (NCBI) database in March 2023 and 30 additional samples, including 25 clinical samples (frozen isolates in glycerol, active culture plates, or PCR-positive samples in BHI broth) and five WGS data sets obtained from state diagnostic laboratories, including Salisbury Animal Health Laboratory (SAHL; Salisbury, Maryland); Iowa State Diagnostic Laboratory (Ames, Iowa), Lasher Laboratory (Georgetown, Delaware), Ohio Animal Diseases Diagnostic Laboratory (ADDL; Reynoldsburg, Ohio), and CEVA Animal Health (Lenexa, Kansas).

Techniques: